We know Ignatius believed in the real presence, as do I and so does everyone I know who is called Christian. It's how we define what that means that differs. Jesus said wherever two or more are gathered in my name, there am I in their midst. The presence of Christ is real at the communion. Luke 24:30-32.
30 And it came to pass, as he sat at meat with them, he took bread, and blessed it, and brake, and gave to them.
31 And their eyes were opened, and they knew him; and he vanished out of their sight.
32 And they said one to another, Did not our heart burn within us, while he talked with us by the way, and while he opened to us the scriptures?
Construe simply means to read and interpret what is read. There is nothing that is written that isn't construed by the reader. As for Clement of Alexandria, his words make perfect sense if one envisions that he is talking about the risen Christ who ate bread in the scripture above and was thought he was a ghost in the scripture below.
37 But they were terrified and affrighted, and supposed that they had seen a spirit.
True, but to count Clement of Alexandria a heretic, is a dangerous proposition when we are judged by how we judge others. I would rather seek to exonerate and be wrong, than condemn and be wrong. So keeping in mind the scriptures posted above and that Clement is talking about the risen Christ, let us re- read this that Clement was accused of being a heretic for.
In regard to the Savior, however, it were ridiculous to suppose that the body demanded, as a body, the necessary aids for its maintenance. For He ate, note for the sake of the body, which had its continuance from a holy power, but lest those in His company might happen to think otherwise of Him, just as afterwards some did certainly supposed that He had appeared as a mere phantasm. He was in general dispassionate; and no movement of feeling penetrated Him, whether pleasure or pain." 2
But Jesus said this also.
John 6:63
It is the spirit that quickeneth; the flesh profiteth nothing: the words that I speak unto you, they are spirit, and they are life.
It is clear that he is talking about his flesh because the line before it says this:
What and if ye shall see the Son of man ascend up where he was before?
I realize it can be scary!!!! But when faced with the unknown fear and superstition can compromise our better judgment. In all honesty, I believe Jesus meant to offend with those words. He had sought solitude from the crowds that he had fed, and they had followed him from the other side of the lake. And so he said this that he knew would offend them, as a means of getting rid of them. There is no way anyone could have comprehended that Jesus was talking about his inevitable death on the cross, or the Eucharist which is the sacrament of the event. There is nothing to be afraid of and I'll prove it. We will be judged either worthy or unworthy when we partake of the communion, but God's judgment is true and His judgment is good and righteous and from perfect Love unto perfect Love. There, that should take care of those pesky fears.
It is factual that molecules can reorder, that is because all things are built on faith, and quantum mechanics are showing this to be true. Water is interesting. Water bears witness unto God according to scripture. I don't know what link was given to youtube. But I have seen, that If one plays Mozart to a glass of water and then freezes it, it will form into symmetrically beautiful crystal formations. But play heavy metal to the water and freeze it, and it forms into chaotic and ugly fractured forms.
As long as one distinguishes the sign from that which it is a sign of, I don't see a problem. I have already mentioned that people were persecuted over who had the power to change the elements of bread and wine into the body and blood of Jesus. Some said only the apostles, or those whom they appointed could do it. But thousands were breaking bread in their own houses from the get go of the Gospel and there is no evidence that any apostle ever appointed any person to have such a power. Here is another example of how a sacrament can be abused:
Judges 8:27King James Version (KJV)
27 And Gideon made an ephod thereof, and put it in his city, even in Ophrah: and all Israel went thither a whoring after it: which thing became a snare unto Gideon, and to his house
Amen, these are words that sow accord, and not division. Did I not say I sense no guile in you? I am right there with you in agreement. Even though we see the cross from two different perspectives, it is the same cross of our Lord.
1 Corinthians 8:1
Now as touching things offered unto idols, we know that we all have knowledge. Knowledge
puffeth up, but Love edifieth.
Matthew 12:30
He that is not with me is against me; and he that
gathereth not with me scattereth abroad.