I am not taking any of the Scripture out of context.
You're taking a lot of Scripture out of context. Your interpretation of John 1:3, believing that "it" is legitimate, for example, is because you're ignoring the context of John 1:1-18. I gave a fair bit of that context, which you have still ignored, that shows Jesus is the Word and why the correct translation in verse 3 (and 2) is "he;" that it cannot be "it."
You have also ignored the context of John 14:17, in making your argument that the correct pronoun for "spirit" is "it."
Joh 14:16 And I will ask the Father, and he will give you another Helper, to be with you forever,
Joh 14:17 even the Spirit of truth, whom the world cannot receive, because it neither sees him nor knows him. You know him, for he dwells with you and will be in you.
First, Jesus says the Father "will give . . .
another Helper." What is "another" if not one like himself? And what is a "Helper"? When we look at the Greek,
parakletos, it means "comforter" or better, "advocate." Interestingly, the noun is masculine, which argues against your insistence that because "spirit" is neuter, it should be referred to as "it." But more importantly than that, an advocate can only be thought of as a person. Persons advocate for other persons. "Its" cannot advocate for anyone or anything.
Parakletos is used only 5 times in the NT. In addition to John 14:6, we have:
Joh 14:26 "But the Helper, the Holy Spirit, whom the Father will send in My name,
He will teach you all things, and
bring to your remembrance all that I said to you."
Joh 15:26 "When the Helper comes, whom I will send to you from the Father, that is the Spirit of truth who proceeds from the Father,
He will testify about Me,"
Joh 16:7 "But I tell you the truth,
it is to your advantage that I go away; for if I do not go away, the Helper will not come to you; but if I go, I will send Him to you."
Joh 16:8 "And He, when He comes,
will convict the world concerning sin and righteousness and judgment;
1Joh 2:1 My little children, I am writing these things to you so that you may not sin. And if anyone sins, we have an Advocate with the Father, Jesus Christ the righteous;
Notice the actions of this other Advocate: teaches; brings things to remembrance; testifies; convicts. These are actions of agency, of a person, not an "it." And Jesus says it is for their advantage that he leave and send this Advocate. How is it, then, that having an "it" would be to their advantage? Could a desk, chair, or rock do any of these things or be of an advantage when Jesus left?
The first rule I learned in my first Bible class. Jesus was divine. He was created from something that God put in Mary's body and whatever it was put God in a position to call him His son. That would make him divine and it's that divine that the Jews wanted to stone him for because to be that divine put Jesus on the same level as God.
And, yet, the context of John 1:1, showing that Jesus is the Word, also states in the Greek that the Word has always existed; it was never created. The Word is divine, that is, the Word has "all the attributes of the divine essence" (M. R. Vincent). It is a qualitative claim as to the nature of the Word.
The Jews would not want to stone him if they thought he said he was God. For that they would have just thought he was insane.
You're splitting hairs unnecessarily here. If Jesus was claiming to be divine, he would be claiming to be God, since for the Jews, there is only one who is divine.